Τίτλος:
Local structure of dilute aqueous DMSO solutions, as seen from molecular dynamics simulations
Γλώσσες Τεκμηρίου:
Αγγλικά
Περίληψη:
The information about the structure of dimethyl sulfoxide (DMSO)-water mixtures at relatively low DMSO mole fractions is an important step in order to understand their cryoprotective properties as well as the solvation process of proteins and amino acids. Classical MD simulations, using the potential model combination that best reproduces the free energy of mixing of these compounds, are used to analyze the local structure of DMSO-water mixtures at DMSO mole fractions below 0.2. Significant changes in the local structure of DMSO are observed around the DMSO mole fraction of 0.1. The array of evidence, based on the cluster and the metric and topological parameters of the Voronoi polyhedra distributions, indicates that these changes are associated with the simultaneous increase of the number of DMSO-water and decrease of water-water hydrogen bonds with increasing DMSO concentration. The inversion between the dominance of these two types of H-bonds occurs around XDMSO = 0.1, above which the DMSO-DMSO interactions also start playing an important role. In other words, below the DMSO mole fraction of 0.1, DMSO molecules are mainly solvated by water molecules, while above it, their solvation shell consists of a mixture of water and DMSO. The trigonal, tetrahedral, and trigonal bipyramidal distributions of water shift to lower corresponding order parameter values indicating the loosening of these orientations. Adding DMSO does not affect the hydrogen bonding between a reference water molecule and its first neighbor hydrogen bonded water molecules, while it increases the bent hydrogen bond geometry involving the second ones. The close-packed local structure of the third, fourth, and fifth water neighbors also is reinforced. In accordance with previous theoretical and experimental data, the hydrogen bonding between water and the first, the second, and the third DMSO neighbors is stronger than that with its corresponding water neighbors. At a given DMSO mole fraction, the behavior of the intensity of the high orientational order parameter values indicates that water molecules are more ordered in the vicinity of the hydrophilic group while their structure is close-packed near the hydrophobic group of DMSO. © 2017 Author(s).
Συγγραφείς:
Idrissi, A.
Marekha, B.A.
Barj, M.
Miannay, F.A.
Takamuku, T.
Raptis, V.
Samios, J.
Jedlovszky, P.
Περιοδικό:
The Journal of Chemical Physics
Εκδότης:
American Institute of Physics Inc.
Λέξεις-κλειδιά:
Complexation; Dimethyl sulfoxide; Hydrogen bonds; Mixtures; Molecular dynamics; Molecules; Solvation, Dimethyl sulfoxide (DMSO); Hydrogen-bond geometry; Hydrogen-bonded water molecules; Hydrophobic groups; Molecular dynamics simulations; Orientational order parameters; Topological parameters; Trigonal bipyramidal, Organic solvents
